Non-adiabatic dynamics of electrons and atoms under non-equilibrium conditions

An approach to non-adiabatic dynamics of atoms in molecular and condensed matter systems under general non-equilibrium conditions is proposed. In this method interaction between nuclei and electrons is considered explicitly up to the second order in atomic displacements defined with respect to the mean atomic trajectory. This method enables one to consider movement of atoms beyond their simple vibrations. Both electrons and nuclei are treated fully quantum-mechanically using a combination of path integrals applied to nuclei and non-equilibrium Green's functions (NEGF) to elections. Our method is partition-less: initially, the entire system is coupled and assumed to be at thermal equilibrium. Then, the exact application of the Hubbard-Stratanovich transformation in mixed real and imaginary times enables us to obtain, without doing any additional approximations, an exact expression for the reduced density matrix for nuclei and hence an effective quantum Liouville equation for them, both containing Gaussian noises. It is shown that the time evolution of the expectation values for atomic positions is described by an infinite hierarchy of stochastic differential equations for atomic positions and momenta and their various fluctuations. The actual dynamics is obtained by sampling all stochastic trajectories. It is expected that applications of the method may include photo-induced chemical reactions (e.g. dissociation), electromigration, atomic manipulation in scanning tunneling microscopy, to name just a few.Comment: 30 pages, 1 fugur

Applications of the Generalised Langevin Equation: towards a realistic description of the baths

The Generalised Langevin Equation (GLE) method, as developed in Ref. [Phys. Rev. B 89, 134303 (2014)], is used to calculate the dissipative dynamics of systems described at the atomic level. The GLE scheme goes beyond the commonly used bilinear coupling between the central system and the bath, and permits us to have a realistic description of both the dissipative central system and its surrounding bath. We show how to obtain the vibrational properties of a realistic bath and how to convey such properties into an extended Langevin dynamics by the use of the mapping of the bath vibrational properties onto a set of auxiliary variables. Our calculations for a model of a Lennard-Jones solid show that our GLE scheme provides a stable dynamics, with the dissipative/relaxation processes properly described. The total kinetic energy of the central system always thermalises toward the expected bath temperature, with appropriate fluctuation around the mean value. More importantly, we obtain a velocity distribution for the individual atoms in the central system which follows the expected canonical distribution at the corresponding temperature. This confirms that both our GLE scheme and our mapping procedure onto an extended Langevin dynamics provide the correct thermostat. We also examined the velocity autocorrelation functions and compare our results with more conventional Langevin dynamics.Comment: accepted for publication in PR

Modelling a Bistable System Strongly Coupled to a Debye Bath: A Quasiclassical Approach Based on the Generalised Langevin Equation

Bistable systems present two degenerate metastable configurations separated by an energy barrier. Thermal or quantum fluctuations can promote the transition between the configurations at a rate which depends on the dynamical properties of the local environment (i.e., a thermal bath). In the case of classical systems, strong system-bath interaction has been successfully modelled by the Generalised Langevin Equation (GLE) formalism. Here we show that the efficient GLE algorithm introduced in Phys. Rev. B 89, 134303 (2014) can be extended to include some crucial aspects of the quantum fluctuations. In particular, the expected isotopic effect is observed along with the convergence of the quantum and classical transition rates in the strong coupling limit. Saturation of the transition rates at low temperature is also retrieved, in qualitative, yet not quantitative, agreement with the analytic predictions. The discrepancies in the tunnelling regime are due to an incorrect sampling close to the barrier top. The domain of applicability of the quasiclassical GLE is also discussed.Comment: 21 pages, 5 figures. Presented at the NESC16 conference: Advances in theory and simulation of non-equilibrium system

Nonequilibrium processes from Generalised Langevin Equations: realistic nanoscale systems connected to two thermal baths

We extend the Generalised Langevin Equation (GLE) method [Phys. Rev. B 89, 134303 (2014)] to model a central classical region connected to two realistic thermal baths at two different temperatures. In such nonequilibrium conditions a heat flow is established, via the central system, in between the two baths. The GLE-2B (GLE two baths) scheme permits us to have a realistic description of both the dissipative central system and its surrounding baths. Following the original GLE approach, the extended Langevin dynamics scheme is modified to take into account two sets of auxiliary degrees of freedom corresponding to the mapping of the vibrational properties of each bath. These auxiliary variables are then used to solve the non-Markovian dissipative dynamics of the central region. The resulting algorithm is used to study a model of a short Al nanowire connected to two baths. The results of the simulations using the GLE-2B approach are compared to the results of other simulations that were carried out using standard thermostatting approaches (based on Markovian Langevin and Nose-Hoover thermostats). We concentrate on the steady state regime and study the establishment of a local temperature profile within the system. The conditions for obtaining a flat profile or a temperature gradient are examined in detail, in agreement with earlier studies. The results show that the GLE-2B approach is able to treat, within a single scheme, two widely different thermal transport regimes, i.e. ballistic systems, with no temperature gradient, and diffusive systems with a temperature gradient.Comment: present version accepted for publication in Phys. Rev. B (Apr 2016

Non-equilibrium statistical mechanics of classical nuclei interacting with the quantum electron gas

Kinetic equations governing time evolution of positions and momenta of atoms in extended systems are derived using quantum-classical ensembles within the Non-Equilibrium Statistical Operator Method (NESOM). Ions are treated classically, while their electrons quantum mechanically; however, the statistical operator is not factorised in any way and no simplifying assumptions are made concerning the electronic subsystem. Using this method, we derive kinetic equations of motion for the classical degrees of freedom (atoms) which account fully for the interaction and energy exchange with the quantum variables (electrons). Our equations, alongside the usual Newtonian-like terms normally associated with the Ehrenfest dynamics, contain additional terms, proportional to the atoms velocities, which can be associated with the electronic friction. Possible ways of calculating the friction forces which are shown to be given via complicated non-equilibrium correlation functions, are discussed. In particular, we demonstrate that the correlation functions are directly related to the thermodynamic Matsubara Green's functions, and this relationship allows for the diagrammatic methods to be used in treating electron-electron interaction perturbatively when calculating the correlation functions. This work also generalises previous attempts, mostly based on model systems, of introducing the electronic friction into Molecular Dynamics equations of atoms.Comment: 18 page

Calculation of electron density of periodic systems using non-orthogonal localised orbitals

Methods for calculating an electron density of a periodic crystal constructed using non-orthogonal localised orbitals are discussed. We demonstrate that an existing method based on the matrix expansion of the inverse of the overlap matrix into a power series can only be used when the orbitals are highly localised (e.g. ionic systems). In other cases including covalent crystals or those with an intermediate type of chemical bonding this method may be either numerically inefficient or fail altogether. Instead, we suggest an exact and numerically efficient method which can be used for orbitals of practically arbitrary localisation. Theory is illustrated by numerical calculations on a model system.Comment: 12 pages, 4 figure

Nonequilibrium Generalised Langevin Equation for the calculation of heat transport properties in model 1D atomic chains coupled to two 3D thermal baths

We use a Generalised Langevin Equation (GLE) scheme to study the thermal transport of low dimensional systems. In this approach, the central classical region is connected to two realistic thermal baths kept at two different temperatures [H. Ness et al., Phys. Rev. B {\bf 93}, 174303 (2016)]. We consider model Al systems, i.e. one-dimensional atomic chains connected to three-dimensional baths. The thermal transport properties are studied as a function of the chain length $N$ and the temperature difference $\Delta T$ between the baths. We calculate the transport properties both in the linear response regime and in the non-linear regime. Two different laws are obtained for the linear conductance versus the length of the chains. For large temperatures ($T \gtrsim 500$ K) and temperature differences ($\Delta T \gtrsim 500$ K), the chains, with $N > 18$ atoms, present a diffusive transport regime with the presence of a temperature gradient across the system. For lower temperatures($T \lesssim 500$ K) and temperature differences ($\Delta T \lesssim 400$ K), a regime similar to the ballistic regime is observed. Such a ballistic-like regime is also obtained for shorter chains ($N \le 15$). Our detailed analysis suggests that the behaviour at higher temperatures and temperature differences is mainly due to anharmonic effects within the long chains.Comment: Accepted for publication in J. Chem. Phy

Fr\'echet frames, general definition and expansions

We define an {\it $(X_1,\Theta, X_2)$-frame} with Banach spaces $X_2\subseteq X_1$, $|\cdot|_1 \leq |\cdot|_2$, and a $BK$-space (\Theta, \snorm[\cdot]). Then by the use of decreasing sequences of Banach spaces ${X_s}_{s=0}^\infty$ and of sequence spaces ${\Theta_s}_{s=0}^\infty$, we define a general Fr\' echet frame on the Fr\' echet space $X_F=\bigcap_{s=0}^\infty X_s$. We give frame expansions of elements of $X_F$ and its dual $X_F^*$, as well of some of the generating spaces of $X_F$ with convergence in appropriate norms. Moreover, we give necessary and sufficient conditions for a general pre-Fr\' echet frame to be a general Fr\' echet frame, as well as for the complementedness of the range of the analysis operator $U:X_F\to\Theta_F$.Comment: A new section is added and a minor revision is don